

Naturally Nourished
Ali Miller RD
Welcome to the Naturally Nourished podcast - your resource for cutting-edge food-as-medicine information! Functional Medicine applied with use of food-as-medicine. Join Ali Miller RD and her cohost Becki Yoo RD as they navigate you through nutrient deficiency, gut health, hormone balance, and optimizing metabolism through a keto reset. Each episode provides research supported approaches to optimizing your health and empowering you and your household.
Episodes
Mentioned books

Mar 23, 2026 • 54min
Episode 487: Blastocystis Hominis
Blastocystis…what? You may not have heard of it but Blastocystis Hominis is a common parasitic gut infection that can wreak havoc on digestion, skin, and immune health. Did you know that 3-5 pounds of your body is made up of bacteria, yeast, parasite, and virus? This microbiome impact can work for you or against you and if you have high stress, eat at risk foods, and travel, chances are it is working against you. In this episode Ali breaks down medical studies on Blastocystis, the role of natural compounds and research that supports successful gut cleanse tools, and how she used her Beat the Bloat Protocol to support metabolic, skin, and immune health.
In this episode you will also learn about the importance of liver detox prior to and during a gut cleanse, the best diet to support a microbiome reset, and food-as-medicine to amplify results.
Don’t miss our Beat the Bloat Masterclass on 4/7! Grab your FREE Spot here
Join our April Beat the Bloat 12 week Gut Cleanse Register here
Beat the Bloat Supplement Bundle.

Mar 16, 2026 • 52min
Episode 486: Protein Sparing Modified Fasting
In this episode, we’re diving into the hot topic of protein sparing modified fasting (PSMF) and why short, strategic “3-day sprints” can be a powerful metabolic reset. Ali shares how these brief hypocaloric phases may help accelerate body fat loss while supporting anti-inflammatory processes and increasing autophagy, the body’s natural cellular cleanup system.
The literature consistently shows that most diets fail long term, with weight regain common within five years, and often much sooner with more aggressive interventions like GLP-1 medications or surgical approaches. In this conversation we explore who may benefit from protein sparing fasts, who should avoid them, where supplements fit in and how to implement this strategy. We also discuss research on autophagy.
Also in this episode:
Beat the Bloat FREE Masterclass 4/7
Beat the Bloat Program starts 4/21
What is a protein sparing modified fast?
A Systematic Review of Evidence on the Use of Very Low Calorie Diets in People with Diabetes - PubMed
The protein-sparing modified fast for obese patients with type 2 diabetes
What does a day of fasting this way look like?
A protein sparing fast can be broken into 1 meal and 2 snacks or 2 meals or even 3 meals, but I typically do:
Coffee with Pure Collagen and ½ scoop Whey Protect with 1 Tbsp heavy cream (26g protein, 150 cal)
1 jar FOND (15g protein 60 cal)
6oz filet of wild salmon (300 cal 33g pro)
1 jar of FOND (15g protein 60 cal)
Naturally Nourished Teas
Thoughts on dry fasting or water fasting
Does protein disrupt autophagy?
A high protein meal does not change autophagy in human blood
In Defense of Protein
Effects Of Oral Glutamine on Inflammatory and Autophagy Responses in Cancer Patients Treated With Abdominal Radiotherapy: A Pilot Randomized Trial
Bone Broth benefits
Glycine Relieves Intestinal Injury by Maintaining mTOR Signaling and Suppressing AMPK, TLR4, and NOD Signaling in Weaned Piglets after Lipopolysaccharide Challenge
Curcumin induces autophagy, inhibits proliferation and invasion by downregulating AKT/mTOR signaling pathway in human melanoma cells - PubMed
Who should consider PSMF and who should not?
What supplements support PSMF?
Detox Packs
Multidefense
Relax and Regulate
Berberine Boost
Calm and Clear
GabaCalm

Mar 9, 2026 • 1h 15min
Episode 485 Perimenopause Reset with Dr. Jen
Are you perimenopausal or in your 30s-50s and your hormones feel off? In this guest episode with Dr. Jen Pfleghaar, Ali Miller RD digs into drivers of hormone imbalance and how women often find themselves in a state of overwhelm of overcommitment leading to overdrive mode. Dr. Jen shares her faith-based functional medicine pearls on ways to manage chronic stress as well as supplements and foods to support hormone balance.
In this episode we also talk about Cycle Syncing and Dr. Jen shares her approach to work with the body based on cyclical shifts to support hormone health, regulate period cycles, and feel your best. She also shares her perspective and experience working with injectable and nasal peptides as tools in clinical practice. This is a fun encouraging listen with a lot of tips and tricks to optimize and thrive in your body.
Want to be a Naturally Nourished Ambassador? Apply here
Beat the Bloat Free Masterclass 4/7 at 12pm CST Register here!
Relax and Regulate has been reformulated
Is stress messing with your hormones? Consider our Stress Support Bundle or Anti-Anxiety Jumpstart
Seeking Whole Health Conference in Ohio SOLD OUT
Where to find more about Dr. Jen www.healthybydrjen.com
Get Dr. Jen’s free cycle syncing protocol https://www.healthybydrjen.com/cyclesyncing
Welcome to the Naturally Nourished Podcast, you are joining me, Ali Miller for episode 485 The Perimenopause Reset with guest Dr. Jen Pfleghaar.
Dr. Jen Pfleghaar, DO, ABOIM
BIO:
Dr. Jen Pfleghaar is a double board-certified physician in Emergency and Integrative Medicine. She earned her medical degree from Lake Erie College of Osteopathic Medicine, completed residency at St. Vincent’s Mercy Hospital, and fellowship at the Andrew Weil Center for Integrative Medicine. She believes true wellness thrives when body, mind, and spirit are aligned with God’s design.
Diagnosed with Hashimoto’s, she became passionate about autoimmune healing, hormone balance, and root-cause medicine. Dr. Jen co-authored Eat. Sleep. Move. Breathe., serves on the boards of the Invisible Disabilities Association and American Board of Integrative Medicine.
Through her practice, Healthy by Dr. Jen, she provides virtual care and shares education as @integrativedrmom. She lives on a mini farm in Tennessee with her husband and four children. She loves cheering at her kids’ games, lifting weights, reading Scripture, and tending to her chickens.
Her newest book, The Perimenopause Reset, was written on a mission to change the health of 500,000 women navigating perimenopause—empowering them with faith-based, science-backed strategies to reclaim their energy, clarity, and joy.
Working in the ER I realized medicine is broken and completely a fellowship in Integrative Medicine so I could change medicine one patient at a time.
Cycle Syncing Secrets: How to Eat, Train, and Thrive in Perimenopause

Mar 2, 2026 • 1h 16min
Episode 484: ADHD, Autism & Oxidative Stress
Are ADHD and autism purely genetic and neurological, or could oxidative stress be a missing piece of the puzzle? In this episode of the Naturally Nourished Podcast, we unpack the growing conversation around how excessive oxidative burden and low antioxidant status may influence brain chemistry, behavior, and symptom expression. We explore how modern inputs like environmental exposures, dietary patterns, metabolic stress, and toxin load can contribute to neurological inflammation and why looking upstream at root drivers can shift how we approach support strategies.
We also break down what actually helps lower oxidative stress in practical, sustainable ways, from stabilizing blood sugar and prioritizing protein to increasing antioxidant-rich produce and targeted nutrient support. This conversation connects the dots between physiology and daily habits, giving you tangible tools to support neurological resilience, mood regulation, and cognitive function using food-as-medicine.
Also in this episode:
Episode 138 Autism, ADHD and Functional Pediatrics with Guest Dr. Emily Gutierrez
Episode 201 Autism and ADHD: A Functional Approach
Symptoms and presentation of ADHD & Autism
Prevalence of ADHD & Autism
Conventional treatment of ADHD & Autism
Multiavail Kids
B Complex
Root Causes of ADHD & Autism
Genetics
Episode 214 Genetic SNP Review and Medical Autonomy
Blood Sugar Balance
A Ketogenic Diet and the Treatment of Autism Spectrum Disorder
Whey Protect
A modified ketogenic gluten-free diet with MCT improves behavior in children with autism spectrum disorder
Kids Essentials Bundle
EPA DHA Liquid
Microbiome Imbalance
Kids Biotic
Restore Baseline Probiotic
Antioxidant Status
NAC & Glutathione
A Randomized Controlled Pilot Trial of Oral N-Acetylcysteine in Children with Autism - PMC
The potential role of the antioxidant and detoxification properties of glutathione in autism spectrum disorders: a systematic review and meta-analysis
Sulforaphane
Chemical derived from broccoli sprouts shows promise in treating autism
The effect of sulforaphane on autism spectrum disorder: systematic review and meta-analysis - PMC
Heavy Metals
10 Day Detox
Micronutrient Panel
Supplements for Support
Cellular Antiox
Relax and Regulate
Kids Essentials Bundle
Calm and Clear
Sponsors for this episode:
This episode is sponsored by FOND Bone Broth, your sous chef in a jar. FOND’s bone broths and tallows are produced in small batches with premium ingredients from verified regenerative ranches. Their ingredients are synergistically paired for maximum absorption, nutritional benefit, and flavor. Use code NATURALLY to save at fondbonebroth.com and check out their new demi glace and duck fat!

Feb 23, 2026 • 1h 4min
Episode 483: Hot Take on Peptides
Are peptides the wellness world’s newest miracle, or just the latest overhyped biohack? With ads for injectable weight-loss solutions everywhere you look and wellness influencers calling peptides the holy grail, we’re taking a step back to unpack what’s actually going on beneath the marketing. In this episode, we break down what peptides are, what they do in the body, and why they’ve suddenly exploded in popularity across both clinical and wellness spaces.
We’re also diving into the questions we know you’re really asking—are peptide injections actually safe, who (if anyone) are they appropriate for, and what should give you pause? This conversation walks through the mechanisms, risks, and real-world considerations from a functional medicine lens as well as how you can get similar results without subjecting yourself to expensive weekly injections.
Also in this episode:
Relax and Regulate now reformulated - use RELAX15 for 15% off
What are peptides?
Episode 474 Hack Your Health Recap: A-ha's and New Products Ali is Stoked About
Sourcing and mechanism of action
Applications of peptides
Naturally sequenced peptides vs. unnatural amino acids
Cellular Antiox
Pure Collagen
Concerns of peptides
Episode 323 Ozempic, Wonder Drug or Too Good to be True?
Episode 359 Oh-No Ozempic Updates, Berberine and Keto
How to naturally increase GLP-1
Berberine Boost
Super Turmeric
Adaptogen Boost
EPA DHA Extra
Restore Baseline Probiotic
How to mimic tissue repair from BPC-157
Pure Collagen
Bio-C Plus
EPA DHA Extra
GI Lining Support
Super Turmeric
Episode 293 How to Get More Fish in the Diet
Tuna Salad with 2 Secret Ingredients
What you can use for beauty besides GHK-Cu
Lifewave Patches
Micronutrient Panel
Risks of peptides
Why keto will make a comeback
Archive Keto Program
Advanced Metabolic Panel
This episode is sponsored by Naturally Nourished Relax and Regulate
Relax & Regulate has always been a superstar for sleep, stress, and hormone support, and we’ve taken a good thing and made it even better! We’ve seen incredible results with 1000’s of clients using Relax and Regulate literally every day for 10+ years now.
We have increased magnesium bisglycinate from 200 mg to 250 mg to match clinical sleep research dosing, kept myo-inositol at the full 4-gram therapeutic dose, and improved the supporting ingredients so the entire formula is better absorbed, better tolerated, and more aligned with what we’re seeing clinically every day. Use code RELAX15 to save 15% on our reformulated Relax and Regulate!

Feb 16, 2026 • 46min
Episode 482: Myoinositol
Have you ever heard of inositol? Could you be deficient and not even realize it? If you’re struggling with blood sugar swings, irregular cycles, anxiety, or 2am wake-ups, could this overlooked compound be a missing piece? While magnesium, B vitamins, and electrolytes dominate most wellness conversations, myo-inositol plays a critical role in insulin signaling, ovarian function, and neurotransmitter balance, acting as an intracellular messenger that helps your cells properly respond to hormonal cues.
This episode unpacks what myo-inositol actually is, how it functions in the body, and what the research shows in areas like PCOS, insulin resistance, fertility, mood disorders, and sleep. It also covers therapeutic dosing, food sources, and how to use supplementation strategically for clinical outcomes. Whether you’re navigating hormone imbalance, metabolic dysfunction, or nervous system dysregulation, this conversation takes a deeper look at why myo-inositol deserves far more attention in root-cause medicine.
Also in this episode:
What is inositol?
What does it do in the body?
What causes myoinositol deficiency?
Symptoms of deficiency
Episode 470: SSRIs on the Rise: Concerns and Safer alternatives
Episode 430: Keto and PCOS
Inositol and Metabolic Health
Ovulatory and Metabolic Effects of d-Chiro-Inositol in the Polycystic Ovary Syndrome | New England Journal of Medicine
Effects of inositol on ovarian function and metabolic factors in women with PCOS: a randomized double blind placebo-controlled trial - PubMed
Potential role and therapeutic interests of myo-inositol in metabolic diseases - PubMed
Myo-inositol effects in women with PCOS: a meta-analysis of randomized controlled trials - PMC
Myoinositol vs. Metformin in Women with Polycystic Ovary Syndrome: A Randomized Controlled Clinical Trial - PMC
The Comparative Effects of Myo-Inositol and Metformin Therapy on the Clinical and Biochemical Parameters of Women of Normal Weight Suffering from Polycystic Ovary Syndrome
Inositol is an effective and safe treatment in polycystic ovary syndrome: a systematic review and meta-analysis of randomized controlled trials - PubMed
Full article: Comparison of metformin plus myoinositol vs metformin alone in PCOS women undergoing ovulation induction cycles: randomized controlled trial
The effects of inositol supplementation on lipid profiles among patients with metabolic diseases: a systematic review and meta-analysis of randomized controlled trials
Inositol for Mental Health
Double-blind, placebo-controlled, crossover trial of inositol treatment for panic disorder - PubMed
Double-blind, controlled, crossover trial of inositol versus fluvoxamine for the treatment of panic disorder - PubMed
Inositol treatment of obsessive-compulsive disorder - PubMed
D-Chiro inositol vs. Myoinositol
Food sources of inositol
Dosage, safety and tolerability
1-2 scoops Relax and Regulate
This episode is sponsored by Naturally Nourished Relax and Regulate
Relax & Regulate has always been a superstar for sleep, stress, and hormone support, and we’ve taken a good thing and made it even better! We’ve seen incredible results with 1000’s of clients using Relax and Regulate literally every day for 10+ years now.
We have increased magnesium bisglycinate from 200 mg to 250 mg to match clinical sleep research dosing, kept myo-inositol at the full 4-gram therapeutic dose, and improved the supporting ingredients so the entire formula is better absorbed, better tolerated, and more aligned with what we’re seeing clinically every day. Use code RELAX15 to save 15% on our reformulated Relax and Regulate!

Feb 9, 2026 • 58min
Episode 481: Is Your Magnesium Working For You? Relax and Regulate Reformulation
Have you tried magnesium but felt like it didn’t help—or even made things worse? Are you confused by all the different forms and dosages? In this episode, Ali and Becki break down how magnesium actually works in the body, why so many people think they “don’t tolerate” magnesium, and why form, dose, and context matter far more than most realize.
We also share the full story behind the reformulation of Relax & Regulate, our superstar magnesium product. You’ll learn why we chose magnesium bisglycinate paired with myo-inositol, how this combination supports nervous system regulation, sleep, anxiety, blood sugar, and hormone balance, and why it’s especially impactful for PCOS, perimenopause, and stress-driven symptoms.
Also in this episode:
Why is magnesium so important?
Signs of magnesium deficiency
Testing magnesium status
Cell Science Systems Micronutrient Panel
Episode 440 What does HTMA say about your health with guest Kaely McDevitt
Anxiety and Magnesium Deficiency
Naturally Nourished Episode 470 SSRIs on the Rise
The magnesium GABA connection
GabaCalm
How inositol supports serotonin
Why the combination of magnesium and inositol for blood sugar balance
Why magnesium deficiency is more pronounced in perimenopause
Forms of magnesium and absorption
Considerations of magnesium threonate
Why glycine matters and antiaging effects
Naturally Nourished Episode 331 Homocysteine and Methylation
Dosage considerations
1 scoop for maintenance
2+ scoops for PCOS, constipation, high cortisol, pregnancy
Kids can start with ⅛-¼ scoop as early as age 2-3
Teens ½-1 scoop to start for acne, anxiety, hormonal concerns
This episode is sponsored by Naturally Nourished Relax and Regulate
Relax & Regulate has always been a superstar for sleep, stress, and hormone support, and we’ve taken a good thing and made it even better! We’ve seen incredible results with 1000’s of clients using Relax and Regulate literally every day for 10+ years now.
We have increased magnesium bisglycinate from 200 mg to 250 mg to match clinical sleep research dosing, kept myo-inositol at the full 4-gram therapeutic dose, and improved the supporting ingredients so the entire formula is better absorbed, better tolerated, and more aligned with what we’re seeing clinically every day. Use code RELAX15 to save 15% on our reformulated Relax and Regulate!

Feb 1, 2026 • 58min
Episode 480: Stone Milled Flour vs Standard
Are you gluten-free or not tolerating gluten and wondering why? Have you heard the sourdough craze and are curious about the differences of heirloom vs. conventional gluten grains? In this week’s podcast, Ali interviews James Brown or Barton Springs Mill about stone ground flour and heritage whole grains. In this episode you will learn about the industrial agriculture growing and harvesting process including the use of glyphosate and other chemical additives and how to shop for truly chemical-free flour. James shares the story of partnering with American growers and the importance of relationships with real food farmers to fix the broken food system.
In this episode you will learn about the grain milling process and why synthetic enrichment is seen in most-flours including those certified organic. Learn how stone milling retains bioavailable nutrients, enzymes, and other key players in enhancing digestibility and nutrient density. Ali and James talk about best uses of stone milled flours and how to adjust recipes for best outcomes as well as their favorite blends from Barton Springs Mill.
Links from this episode:
Use our Digestive Basics to support optimal digestion and reduce bloating https://alimillerrd.com/products/digestive-basics-bundle
Not sure if your gut is working for you or against you?
Take our probiotic challenge https://alimillerrd.com/pages/probiotic-challenge-protocol
Explore heirloom stone milled flour at bartonspringsmill.com 10% ALIMILLERRD off first order

Jan 26, 2026 • 1h 9min
Episode 479: Somatic Ways to Reduce Stress
In this episode, we’re digging into a topic that underlies everything we do in functional medicine but rarely gets the airtime it deserves: somatic ways to reduce stress. We step outside the usual conversations about labs, supplements, pathophysiology, and food as medicine to talk about what it actually looks like to regulate your nervous system in real life. Because while “reduce your stress” is one of the most common recommendations in a healing protocol, very few people are ever taught how to do that in a tangible, embodied way.
This is a deeply practical episode focused on helping you release stored tension and trapped stress from the body using simple somatic tools. We explore why trauma and chronic stress don’t just live in your brain--they can show up as disease, pain, and symptoms in your body and can get in the way of healing. You’ll walk away with approachable techniques you can start using immediately to calm your nervous system, improve resilience, and support your body’s ability to heal.
Also in this episode:
Episode 447: Stress Management Tools to Reset your HPA-Axis
Episode: 438 Vagus Nerve
Episode 424: How Daily Walking Can Transform Your Health
Episode 171: Movement as Medicine
Adaptogen Boost 18% off with code ADAPT18
Signs of a dysregulated nervous system
What is somatic therapy?
How breath can regulate stress responds
4-7-8 Breath
How scent can support stress response
Episode 455: Jodi Cohen of Vibrant Blue Oils
Tracing the scent of fear: Study identifies region of brain involved in fear response - Fred Hutch
Aromatherapy through the lens of trauma-informed care: Stress-reduction practices for healthcare professionals - ScienceDirect
Get a bottle of the Parasympathetic Blend for just $15 + free shipping! ($38.95)
5-4-3-2-1 technique
Relaxing with Touch
Movement as Medicine
Walking Pad C2 Link https://collabs.shop/gzeqhw
Episode 322: Nature as Medicine
Sound and vibration
5 Reasons to Gargle Salt Water and How to Do it
Naturally Nourished Episode 394 The Human Electrical Force
Functional Medicine Support for stress
How To Use NutriSense CGM (Reviewing 14 Days of Data)
Labrix Neurohormone Panel
Heart Rate Variability
Adaptogen Boost
Calm and Clear
Adrenal Support
GABACalm
Relax and Regulate
Stress Manager Bundle
Anti-Anxiety Bundle
This episode is sponsored by:
This episode is sponsored by Naturally Nourished Supplements providing: Purity, Potency, and Efficacy at a value you can’t beat! My goal with Naturally Nourished supplements is to provide you with products that will enhance and reclaim the quality of life for you and your loved ones!
We will always price formulas 2-5% below market industry standard and competitors. On top of this we offer subscription discounts at an additional 10% off, bundled discounts at an additional 12% off, and seasonal promotions to ensure quality formulas are accessible.
Use the code PODCAST10 for 10% off your next purchase.

Jan 20, 2026 • 1h 12min
Episode 478: Our Take on the New Dietary Guidelines
This week on the Naturally Nourished Podcast, we’re digging into the newly released governmental nutrition guidelines. If you’ve been around here for any length of time, you know our core message has always been simple: eat real food. So imagine our surprise when these updated guidelines actually move closer to that exact philosophy, emphasizing whole foods, nutrient density, and fewer ultra-processed ingredients. It’s not perfect, but it’s a meaningful shift in the right direction, and one we never thought we’d see from official policy.
In this episode, we break down what the guidelines got right, where they still miss the mark, and what this all means for real families navigating grocery stores, school lunches, and confusing nutrition messaging. We also revisit Ali’s Optimal Eating Wheel she developed back in 2014 and compare it side-by-side with today’s recommendations — and yes, she was about a decade ahead of her time. We share our top critiques from a food-as-medicine lens and unpack the potential ripple effects on schools, SNAP, and institutional food systems so you can understand how these changes may actually show up in everyday life.
Also in this episode:
LIVE Food-as-Medicine Keto Reset
Naturally Nourished Academy Mentorship Program starts 2/4
Naturally Nourished Episode 465 Naturally Nourished Academy Part 1
Naturally Nourished Episode 466 Naturally Nourished Academy Part 2
Naturally Nourished Episode 472 Good, Better, Best with Brenda Bennett
Our Thoughts on the New Guidelines
Realfood.gov
The Power of Protein
Baby Led Weaning
Naturally Nourished Kids use code GIVEHEALTH
Naturally Nourished Food as Medicine for the Whole Family
This episode is sponsored by:
This episode is sponsored by Naturally Nourished Supplements providing: Purity, Potency, and Efficacy at a value you can’t beat! My goal with Naturally Nourished supplements is to provide you with products that will enhance and reclaim the quality of life for you and your loved ones!
We will always price formulas 2-5% below market industry standard and competitors. On top of this we offer subscription discounts at an additional 10% off, bundled discounts at an additional 12% off, and seasonal promotions to ensure quality formulas are accessible. Use the code PODCAST10 for 10% off your next purchase.


